According to the Port Authority website there is
no problem for kayakers to be on the water:
Q: Is kayaking/water skiing/stand up paddle boarding on San Diego Bay permitted?
A: Consistent with state orders regarding recreation, outdoor exercise is allowed so long as you can maintain a safe social distance of six feet from people who aren’t part of your household. Per the state stay-at-home order, non-essential gatherings of any size are not allowed. Everyone has the responsibility to “Flatten the COVID-19 Curve” by maintaining a social distance of 6 feet or more when recreating in the outdoors, and staying home if they are sick. If you cannot maintain social distancing, you need to go elsewhere or return home.
